LAMMPS on CFAM
To run LAMMPS on CFAM create your LAMMPS input file and the Submit Script shown below. Add both to a directory in your user folder.
Submit Script
#!/bin/bash
#SBATCH -n 10
#cd /home/username/currentdirectory
module load mvapich2-2.1/intel
mpirun -np 10 /opt/lammps/bin/lmp_icc_cfam_basic < mylammpsfile.txt > mylammpsoutput.out
Use the cd command to enter the directory of your submit script and run the following command:
sbatch LAMMPS_Submit_Script.sh
This will run your job and put your output file in the "currentdirectory".